Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterised protein | SAMEA3472110_04013 | Not Available | Negative | 4127684 - 4128556 | 33536.7 |
| trhi | SAMEA3472110_04014 | Not Available | Negative | 4128951 - 4130735 | 67330.2 |
| uncharacterised protein | SAMEA3472110_04015 | Not Available | Positive | 4130915 - 4131787 | 31362.9 |
| conjugal transfer mating pair stabilization protein tran | SAMEA3472110_04016 | Not Available | Negative | 4131816 - 4135004 | 116884.0 |
| trhu | SAMEA3472110_04017 | Not Available | Negative | 4135023 - 4136081 | 38908.5 |
| uncharacterised protein | SAMEA3472110_04018 | Not Available | Negative | 4136087 - 4136221 | 5053.18 |
| trhw | SAMEA3472110_04019 | Not Available | Negative | 4136223 - 4137734 | 56458.1 |
| trhf | SAMEA3472110_04020 | Not Available | Negative | 4137721 - 4138233 | 19397.9 |
| protein of uncharacterised function (duf3607) | SAMEA3472110_04021 | Not Available | Negative | 4138511 - 4142815 | 158524.0 |
| putative plasmid transfer protein | SAMEA3472110_04022 | Not Available | Negative | 4142935 - 4143516 | 21590.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





