Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cell division protein zipa | SAMEA3472110_03923 | Not Available | Positive | 4036795 - 4037712 | 33950.4 |
| dna ligase | SAMEA3472110_03924 | Not Available | Positive | 4037783 - 4039798 | 73617.3 |
| protein | SAMEA3472110_03925 | Not Available | Positive | 4039801 - 4040019 | 8415.57 |
| sodium/bile acid symporter family (mazg-like) | SAMEA3472110_03926 | Not Available | Negative | 4040016 - 4041014 | 36403.9 |
| lysr family transcriptional regulator | SAMEA3472110_03927 | Not Available | Positive | 4041104 - 4041523 | 15779.0 |
| lysr family transcriptional regulator | SAMEA3472110_03928 | Not Available | Positive | 4041563 - 4042030 | 16764.6 |
| nucleoside-specific channel-forming protein tsx | SAMEA3472110_03929 | Not Available | Negative | 4042068 - 4042832 | 29265.6 |
| purine nucleoside phosphorylase | SAMEA3472110_03930 | Not Available | Positive | 4043081 - 4043914 | 29913.5 |
| xanthosine permease | SAMEA3472110_03931 | Not Available | Positive | 4043974 - 4045230 | 46090.4 |
| dna-binding transcriptional activator xapr | SAMEA3472110_03932 | Not Available | Positive | 4045482 - 4046366 | 33585.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





