Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative alcohol dehydrogenase | SAMEA3472110_03903 | Not Available | Positive | 4016207 - 4017370 | 42113.5 |
| 2,5-diketo-d-gluconic acid reductase a | SAMEA3472110_03904 | Not Available | Positive | 4017475 - 4018302 | 31111.4 |
| putative peroxidase | SAMEA3472110_03905 | Not Available | Positive | 4018753 - 4019652 | 33072.1 |
| periplasmic esterase | SAMEA3472110_03906 | Not Available | Negative | 4019710 - 4021011 | 47496.8 |
| n-acetylmuramic acid-specific pts system eiibc component | SAMEA3472110_03907 | Not Available | Negative | 4021016 - 4022440 | 49813.1 |
| n-acetylmuramic acid 6-phosphate etherase | SAMEA3472110_03908 | Not Available | Negative | 4022444 - 4023340 | 31086.7 |
| rpir-family transcriptional regulator | SAMEA3472110_03909 | Not Available | Positive | 4023512 - 4024369 | 31399.8 |
| short chain dehydrogenase | SAMEA3472110_03910 | Not Available | Positive | 4024498 - 4025289 | 27865.7 |
| thiosulfate abc transporter, substrate-binding protein | SAMEA3472110_03911 | Not Available | Positive | 4025460 - 4026476 | 37629.6 |
| sulfate | SAMEA3472110_03912 | Not Available | Positive | 4026476 - 4027309 | 30293.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





