Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein | SAMEA3472110_03893 | Not Available | Negative | 4007532 - 4007819 | 10962.1 |
| hydrolase | SAMEA3472110_03894 | Not Available | Negative | 4007938 - 4008825 | 32590.6 |
| putative aldo/keto reductase | SAMEA3472110_03895 | Not Available | Positive | 4008982 - 4010022 | 38858.4 |
| inner membrane protein | SAMEA3472110_03896 | Not Available | Negative | 4010062 - 4010556 | 18642.3 |
| oxidoreductase | SAMEA3472110_03897 | Not Available | Positive | 4010747 - 4011631 | 31489.8 |
| biopolymer transport protein | SAMEA3472110_03898 | Not Available | Negative | 4011670 - 4012095 | 15527.9 |
| biopolymer transport protein | SAMEA3472110_03899 | Not Available | Negative | 4012102 - 4012836 | 26289.0 |
| cystathionine beta-lyase | SAMEA3472110_03900 | Not Available | Positive | 4013088 - 4014275 | 43129.7 |
| inner membrane protein | SAMEA3472110_03901 | Not Available | Positive | 4014415 - 4015074 | 24101.3 |
| transcriptional regulator yqhc | SAMEA3472110_03902 | Not Available | Negative | 4015114 - 4016070 | 36030.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





