Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional glutathionylspermidine synthetase/amidase | SAMEA3472110_03883 | Not Available | Negative | 3997745 - 3999604 | 70536.7 |
| glutathione s-transferase | SAMEA3472110_03884 | Not Available | Positive | 3999809 - 4000675 | 32375.3 |
| hydrogenase-2 component protein | SAMEA3472110_03885 | Not Available | Negative | 4000798 - 4001046 | 8808.67 |
| hydrogenase nickel incorporation protein hybf | SAMEA3472110_03886 | Not Available | Negative | 4001059 - 4001400 | 12698.1 |
| hydrogenase-2 component protein | SAMEA3472110_03887 | Not Available | Negative | 4001393 - 4001881 | 17964.7 |
| hydrogenase 2 maturation protease | SAMEA3472110_03888 | Not Available | Negative | 4001874 - 4002368 | 17712.8 |
| hydrogenase-2 large subunit | SAMEA3472110_03889 | Not Available | Negative | 4002368 - 4004071 | 62494.6 |
| ni/fe-hydrogenase 2 b-type cytochrome subunit | SAMEA3472110_03890 | Not Available | Negative | 4004068 - 4005246 | 43634.7 |
| hydrogenase-2 subunit | SAMEA3472110_03891 | Not Available | Negative | 4005236 - 4006222 | 36005.9 |
| hydrogenase-2 small chain | SAMEA3472110_03892 | Not Available | Negative | 4006225 - 4007343 | 39682.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





