Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cobinamide adenosyltransferase (cobalamine adenosyltransferase) | SAMEA3472110_03802 | Not Available | Positive | 3914180 - 3914782 | 22387.7 |
| lysr family transcriptional regulator | SAMEA3472110_03803 | Not Available | Negative | 3914816 - 3915721 | 34393.4 |
| protein rtcb | SAMEA3472110_03804 | Not Available | Positive | 3916311 - 3917708 | 51170.4 |
| succinyl-coa ligase subunit alpha | SAMEA3472110_03805 | Not Available | Negative | 3917806 - 3918675 | 29779.3 |
| succinyl-coa synthetase beta chain with atp-grasp domain | SAMEA3472110_03806 | Not Available | Negative | 3918675 - 3919841 | 41376.1 |
| dihydrolipoamide succinyltransferase component (e2) | SAMEA3472110_03807 | Not Available | Negative | 3919935 - 3921152 | 44014.0 |
| 2-oxoglutarate dehydrogenase e1 component | SAMEA3472110_03808 | Not Available | Negative | 3921167 - 3923968 | 105068.0 |
| succinate dehydrogenase | SAMEA3472110_03809 | Not Available | Negative | 3924169 - 3924885 | 26785.4 |
| succinate dehydrogenase flavoprotein subunit | SAMEA3472110_03810 | Not Available | Negative | 3924901 - 3926667 | 64439.6 |
| succinate dehydrogenase hydrophobic membrane anchor protein | SAMEA3472110_03811 | Not Available | Negative | 3926667 - 3927014 | 12868.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





