Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterised protein | SAMEA3472110_03792 | Not Available | Positive | 3902744 - 3903688 | 36335.2 |
| uncharacterised protein | SAMEA3472110_03793 | Not Available | Positive | 3903769 - 3904191 | 15659.4 |
| methylaspartate mutase subunit s | SAMEA3472110_03794 | Not Available | Positive | 3904739 - 3905188 | 16372.7 |
| methylaspartate mutase | SAMEA3472110_03795 | Not Available | Positive | 3905188 - 3906576 | 50532.5 |
| methylaspartate mutase e chain | SAMEA3472110_03796 | Not Available | Positive | 3906595 - 3908040 | 53114.8 |
| methylaspartate ammonia-lyase | SAMEA3472110_03797 | Not Available | Positive | 3908040 - 3909281 | 45550.7 |
| putative 3-methylaspartate ammonia-lyase, glutamate mutase | SAMEA3472110_03798 | Not Available | Positive | 3909285 - 3910655 | 49069.4 |
| uncharacterised protein | SAMEA3472110_03799 | Not Available | Positive | 3910652 - 3910969 | 11912.4 |
| putative symport protein | SAMEA3472110_03800 | Not Available | Positive | 3911130 - 3912410 | 45351.1 |
| class i fumarate hydratase | SAMEA3472110_03801 | Not Available | Positive | 3912518 - 3914170 | 60056.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





