Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminoimidazole riboside kinase | SAMEA3472110_03670 | Not Available | Negative | 3788217 - 3788954 | 27234.6 |
| putative dead-box helicase-like protein | SAMEA3472110_03671 | Not Available | Positive | 3789404 - 3794740 | 200760.0 |
| 5-methylcytosine-specific restriction enzyme mcrbc subunit mcrc | SAMEA3472110_03672 | Not Available | Negative | 3794797 - 3795843 | 40487.0 |
| 5-methylcytosine-specific restriction enzyme subunit mcrb | SAMEA3472110_03673 | Not Available | Negative | 3795843 - 3797240 | 53799.9 |
| ecoki restriction-modification system protein hsds | SAMEA3472110_03675 | Not Available | Negative | 3797953 - 3799323 | 50606.8 |
| type i restriction enzyme stysji m protein | SAMEA3472110_03676 | Not Available | Negative | 3799320 - 3800909 | 59276.8 |
| type i restriction enzyme ecoki subunit r | SAMEA3472110_03677 | Not Available | Negative | 3801110 - 3804622 | 134124.0 |
| methylated adenine and cytosine restriction protein | SAMEA3472110_03678 | Not Available | Positive | 3804810 - 3805724 | 33565.8 |
| gtp-binding protein yjia | SAMEA3472110_03679 | Not Available | Negative | 3805770 - 3806726 | 35653.8 |
| yjix protein | SAMEA3472110_03680 | Not Available | Negative | 3806737 - 3806940 | 7729.24 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





