Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphohistidine phosphatase | SAMEA3472110_03660 | Not Available | Negative | 3776172 - 3776657 | 17208.8 |
| fatty acid oxidation complex alpha subunit | SAMEA3472110_03661 | Not Available | Negative | 3776860 - 3779004 | 77141.0 |
| fatty acid oxidation comple beta subunit (3 -ketoacyl-coa thiolase) | SAMEA3472110_03662 | Not Available | Negative | 3779004 - 3780314 | 46533.3 |
| protein yfcz | SAMEA3472110_03663 | Not Available | Negative | 3780495 - 3780779 | 10318.2 |
| long-chain fatty acid transport protein | SAMEA3472110_03664 | Not Available | Positive | 3781151 - 3782491 | 48513.0 |
| uncharacterised protein | SAMEA3472110_03665 | Not Available | Positive | 3782857 - 3784143 | 48833.5 |
| lipoprotein | SAMEA3472110_03666 | Not Available | Negative | 3784325 - 3785080 | 28037.2 |
| transporter protein | SAMEA3472110_03667 | Not Available | Positive | 3785257 - 3786306 | 39004.6 |
| Trna-arg | Not Available | Not Available | Positive | 3786382 - 3786456 | Not Available |
| galactoside permease | SAMEA3472110_03669 | Not Available | Negative | 3786898 - 3788145 | 46892.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





