Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n5-glutamine s-adenosyl-l-methionine-dependent methyltransferase | SAMEA3472110_03650 | Not Available | Negative | 3767343 - 3768275 | 35031.7 |
| smr protein/muts2 | SAMEA3472110_03651 | Not Available | Positive | 3768441 - 3768992 | 21000.5 |
| putative fimbrial adhesin | SAMEA3472110_03652 | Not Available | Negative | 3769062 - 3769925 | 31819.0 |
| fimbrial protein | SAMEA3472110_03653 | Not Available | Negative | 3769927 - 3770472 | 19439.2 |
| fimbrial protein | SAMEA3472110_03654 | Not Available | Negative | 3770469 - 3770948 | 17327.4 |
| fimbrial protein | SAMEA3472110_03655 | Not Available | Negative | 3770945 - 3771436 | 17201.7 |
| fimbrial chaperone protein | SAMEA3472110_03656 | Not Available | Negative | 3771452 - 3772201 | 27738.4 |
| fimbrial outer membrane usher protein | SAMEA3472110_03657 | Not Available | Negative | 3772221 - 3772676 | 16303.3 |
| fimbrial outer membrane usher protein | SAMEA3472110_03658 | Not Available | Negative | 3772698 - 3774860 | 79634.2 |
| fimbrial protein | SAMEA3472110_03659 | Not Available | Negative | 3774944 - 3775510 | 19886.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





