Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative phosphodiesterase | SAMEA3472110_03620 | Not Available | Negative | 3739147 - 3739698 | 20015.1 |
| putative glutathione s-transferase | SAMEA3472110_03621 | Not Available | Negative | 3739754 - 3740398 | 24298.9 |
| putative glutathione s-transferase | SAMEA3472110_03622 | Not Available | Positive | 3740534 - 3741181 | 24412.1 |
| d-erythro-7,8-dihydroneopterin triphosphate epimerase | SAMEA3472110_03623 | Not Available | Positive | 3741238 - 3741600 | 14081.8 |
| nad(p)-binding rossmann-fold domain | SAMEA3472110_03624 | Not Available | Positive | 3741621 - 3742514 | 32742.8 |
| transposase | SAMEA3472110_03625 | Not Available | Negative | 3742562 - 3743452 | 34120.3 |
| histidine/lysine/arginine/ornithine transporter subunit | SAMEA3472110_03626 | Not Available | Negative | 3743648 - 3744421 | 28626.8 |
| histidine transport system permease hism | SAMEA3472110_03627 | Not Available | Negative | 3744429 - 3745145 | 26885.3 |
| histidine abc transporter permease | SAMEA3472110_03628 | Not Available | Negative | 3745142 - 3745828 | 24604.9 |
| histidine abc transporter, substrate-binding periplasmic protein | SAMEA3472110_03629 | Not Available | Negative | 3745918 - 3746700 | 28483.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





