Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative aminotransferase | SAMEA3472110_03610 | Not Available | Positive | 3727396 - 3728613 | 45519.9 |
| 5'-nucleotidase | SAMEA3472110_03611 | Not Available | Positive | 3728697 - 3729296 | 22667.2 |
| putative transporter | SAMEA3472110_03612 | Not Available | Negative | 3729433 - 3731265 | 65905.9 |
| putative phosphatase/phosphohexomutase | SAMEA3472110_03613 | Not Available | Negative | 3731352 - 3732002 | 23012.8 |
| yfbu family protein | SAMEA3472110_03614 | Not Available | Negative | 3732013 - 3732507 | 19537.4 |
| inner membrane protein | SAMEA3472110_03615 | Not Available | Negative | 3732590 - 3733045 | 17214.1 |
| acetate/propionate kinase | SAMEA3472110_03616 | Not Available | Positive | 3733383 - 3734585 | 43293.0 |
| phosphate acetyltransferase | SAMEA3472110_03617 | Not Available | Positive | 3734660 - 3736804 | 77162.5 |
| putative c4-dicarboxylate anaerobic transporter | SAMEA3472110_03618 | Not Available | Positive | 3736994 - 3738514 | 54800.0 |
| nudix hydrolase | SAMEA3472110_03619 | Not Available | Negative | 3738547 - 3739089 | 20376.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





