Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein yecm | SAMEA3472110_03554 | Not Available | Positive | 3685767 - 3686333 | 21176.0 |
| copper homeostasis protein | SAMEA3472110_03555 | Not Available | Positive | 3686347 - 3687093 | 26569.1 |
| cytochrome c-type protein | SAMEA3472110_03556 | Not Available | Positive | 3687479 - 3688579 | 40294.6 |
| trimethylamine-n-oxide reductase 2 | SAMEA3472110_03557 | Not Available | Positive | 3688604 - 3691033 | 88952.9 |
| putative methyltransferase | SAMEA3472110_03558 | Not Available | Negative | 3691198 - 3692169 | 37008.6 |
| nadh-quinone oxidoreductase subunit n | SAMEA3472110_03595 | Not Available | Negative | 3709884 - 3711341 | 52065.4 |
| nadh dehydrogenase i subunit m | SAMEA3472110_03596 | Not Available | Negative | 3711348 - 3712877 | 56555.0 |
| nadh-quinone oxidoreductase subunit l | SAMEA3472110_03597 | Not Available | Negative | 3713041 - 3714882 | 66426.1 |
| nadh dehydrogenase i subunit k | SAMEA3472110_03598 | Not Available | Negative | 3714879 - 3715181 | 10845.8 |
| nadh-quinone oxidoreductase chain j | SAMEA3472110_03599 | Not Available | Negative | 3715178 - 3715732 | 19875.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





