Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-arabinose abc transporter, permease protein | SAMEA3472110_03533 | Not Available | Positive | 3663594 - 3664580 | 34199.0 |
| trehalose-6-phosphate phosphatase | SAMEA3472110_03534 | Not Available | Positive | 3664747 - 3665547 | 29207.0 |
| trehalose-6-phosphate synthase | SAMEA3472110_03535 | Not Available | Positive | 3665522 - 3666946 | 53531.0 |
| universal stress protein uspc | SAMEA3472110_03536 | Not Available | Negative | 3666953 - 3667381 | 15669.9 |
| transcriptional activator flhd | SAMEA3472110_03537 | Not Available | Positive | 3668161 - 3668511 | 13317.2 |
| flagellar transcriptional activator | SAMEA3472110_03538 | Not Available | Positive | 3668514 - 3669092 | 21553.3 |
| chemotaxis protein mota (motility protein a) | SAMEA3472110_03539 | Not Available | Positive | 3669219 - 3670106 | 31999.4 |
| chemotaxis protein motb (motility protein b) | SAMEA3472110_03540 | Not Available | Positive | 3670103 - 3671029 | 34158.0 |
| chemotaxis protein chea | SAMEA3472110_03541 | Not Available | Positive | 3671034 - 3672998 | 71391.7 |
| chemotaxis protein | SAMEA3472110_03542 | Not Available | Positive | 3673019 - 3673522 | 18118.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





