Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative fad-dependent oxidoreductase | SAMEA3472110_03477 | Not Available | Negative | 3616409 - 3617680 | 46256.7 |
| 6-pyruvoyl tetrahydrobiopterin synthase | SAMEA3472110_03478 | Not Available | Negative | 3617758 - 3618123 | 13799.7 |
| sulfite reductase (nadph) flavoprotein alpha subunit | SAMEA3472110_03479 | Not Available | Positive | 3618439 - 3620238 | 66299.4 |
| sulfite reductase (nadph) hemoprotein beta subunit | SAMEA3472110_03480 | Not Available | Positive | 3620238 - 3621950 | 63963.8 |
| phosphoadenosine phosphosulfate reductase | SAMEA3472110_03481 | Not Available | Positive | 3622024 - 3622758 | 27958.3 |
| uncharacterised protein | SAMEA3472110_03484 | Not Available | Positive | 3624322 - 3624912 | 23298.9 |
| uncharacterized conserved protein | SAMEA3472110_03485 | Not Available | Positive | 3624909 - 3625967 | 41983.6 |
| uncharacterised protein | SAMEA3472110_03486 | Not Available | Positive | 3626489 - 3627037 | 21204.1 |
| uncharacterised protein | SAMEA3472110_03487 | Not Available | Positive | 3627650 - 3628330 | 25752.2 |
| uncharacterised protein | SAMEA3472110_03488 | Not Available | Negative | 3628508 - 3628741 | 8612.34 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





