Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-met | Not Available | Not Available | Positive | 3563462 - 3563538 | Not Available |
| Trna-met | Not Available | Not Available | Positive | 3563571 - 3563647 | Not Available |
| Trna-met | Not Available | Not Available | Positive | 3563681 - 3563757 | Not Available |
| membrane-bound lytic murein transglycosylase a | SAMEA3472110_03428 | Not Available | Positive | 3563966 - 3565063 | 40412.9 |
| hesa/moeb/thif family protein | SAMEA3472110_03429 | Not Available | Positive | 3565139 - 3565945 | 28545.6 |
| putative fe-s metabolism associated protein | SAMEA3472110_03430 | Not Available | Negative | 3565996 - 3566439 | 15939.2 |
| cysteine sulfinate desulfinase | SAMEA3472110_03431 | Not Available | Negative | 3566439 - 3567644 | 43220.6 |
| putative lipoprotein | SAMEA3472110_03432 | Not Available | Positive | 3567836 - 3568063 | 8174.67 |
| putative transcriptional regulator of glycine cleavage system | SAMEA3472110_03434 | Not Available | Positive | 3568414 - 3569331 | 34403.4 |
| inner membrane protein ygdd | SAMEA3472110_03435 | Not Available | Positive | 3569350 - 3569745 | 14334.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





