Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| prepilin peptidase-dependent protein a | SAMEA3472110_03415 | Not Available | Positive | 3546967 - 3547437 | 17866.3 |
| prepilin peptidase-dependent protein b | SAMEA3472110_03416 | Not Available | Positive | 3547428 - 3547991 | 20428.5 |
| protein | SAMEA3472110_03417 | Not Available | Positive | 3547988 - 3548395 | 14939.3 |
| prepilin peptidase-dependent protein c | SAMEA3472110_03418 | Not Available | Positive | 3548380 - 3548703 | 11985.6 |
| exodeoxyribonuclease v gamma subunit | SAMEA3472110_03419 | Not Available | Positive | 3548716 - 3552084 | 128749.0 |
| protease iii | SAMEA3472110_03420 | Not Available | Positive | 3552260 - 3555148 | 107756.0 |
| exonuclease v subunit beta | SAMEA3472110_03421 | Not Available | Positive | 3555141 - 3558683 | 133997.0 |
| exodeoxyribonuclease v subunit alpha | SAMEA3472110_03422 | Not Available | Positive | 3558683 - 3560509 | 66770.1 |
| amino acid acetyltransferase | SAMEA3472110_03423 | Not Available | Negative | 3560571 - 3561902 | 49198.1 |
| n-acetylmuramoyl-l-alanine amidase | SAMEA3472110_03424 | Not Available | Positive | 3562134 - 3563387 | 45636.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





