Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| major facilitator superfamily protein | SAMEA3472110_03405 | Not Available | Positive | 3537281 - 3538474 | 41624.1 |
| putative aldo/keto reductase | SAMEA3472110_03406 | Not Available | Negative | 3538506 - 3539546 | 38491.7 |
| lipoprotein | SAMEA3472110_03407 | Not Available | Negative | 3539654 - 3539872 | 7877.35 |
| integral membrane transport protein | SAMEA3472110_03408 | Not Available | Negative | 3540010 - 3540723 | 26159.0 |
| dna mismatch repair protein | SAMEA3472110_03409 | Not Available | Negative | 3540792 - 3541481 | 25513.9 |
| uncharacterised protein | SAMEA3472110_03410 | Not Available | Positive | 3541667 - 3541813 | 5231.2 |
| (di)nucleoside polyphosphate hydrolase | SAMEA3472110_03411 | Not Available | Positive | 3542166 - 3542696 | 20796.0 |
| phosphoenolpyruvate-protein phosphotransferase (pts system, enzyme i) | SAMEA3472110_03412 | Not Available | Positive | 3542709 - 3544955 | 83732.8 |
| prolipoprotein diacylglyceryl transferase | SAMEA3472110_03413 | Not Available | Positive | 3545106 - 3545981 | 33142.0 |
| thymidylate synthetase | SAMEA3472110_03414 | Not Available | Positive | 3545988 - 3546782 | 30481.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





