Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adhesin for cattle intestine colonization | SAMEA3472110_03394 | Not Available | Negative | 3518209 - 3521019 | 94089.5 |
| putative type i secretion protein | SAMEA3472110_03395 | Not Available | Negative | 3521128 - 3522483 | 49295.9 |
| putative amino acid permease | SAMEA3472110_03396 | Not Available | Negative | 3522821 - 3524113 | 45659.5 |
| glutaminase 1 | SAMEA3472110_03397 | Not Available | Negative | 3524116 - 3525048 | 32960.3 |
| copper-transporting p-type atpase | SAMEA3472110_03398 | Not Available | Positive | 3525311 - 3527815 | 87931.4 |
| protein ybak containing prolyl-trna synthetase associated domain | SAMEA3472110_03400 | Not Available | Positive | 3529242 - 3529721 | 17093.9 |
| protein usha precursor | SAMEA3472110_03401 | Not Available | Negative | 3529758 - 3531410 | 60764.3 |
| fosmidomycin resistance protein | SAMEA3472110_03402 | Not Available | Positive | 3531628 - 3532848 | 43312.2 |
| putative transport protein | SAMEA3472110_03403 | Not Available | Positive | 3533086 - 3534762 | 59442.3 |
| aas bifunctional protein | SAMEA3472110_03404 | Not Available | Positive | 3535129 - 3537288 | 80788.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





