Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphopantetheinyl transferase | SAMEA3472110_03305 | Not Available | Positive | 3413954 - 3414703 | 27648.2 |
| putative nadph-dependent fmn reductase | SAMEA3472110_03306 | Not Available | Positive | 3414725 - 3415291 | 20376.8 |
| putative permease | SAMEA3472110_03307 | Not Available | Negative | 3415345 - 3416682 | 46829.7 |
| putative phosphatase | SAMEA3472110_03308 | Not Available | Positive | 3416849 - 3417514 | 24754.8 |
| putative type iii effector protein | SAMEA3472110_03309 | Not Available | Negative | 3418128 - 3420059 | 73934.1 |
| putative type iii effector protein | SAMEA3472110_03310 | Not Available | Positive | 3420368 - 3421096 | 28423.1 |
| putative type iii effector protein | SAMEA3472110_03311 | Not Available | Positive | 3421129 - 3421554 | 16376.7 |
| uncharacterised protein | SAMEA3472110_03312 | Not Available | Positive | 3421730 - 3421879 | 5358.67 |
| putative type iii effector protein | SAMEA3472110_03313 | Not Available | Negative | 3422024 - 3424522 | 97110.2 |
| phosphate transport system regulatory protein phou | SAMEA3472110_03314 | Not Available | Negative | 3424949 - 3425674 | 27443.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





