Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| galactonate dehydratase | SAMEA3472110_03285 | Not Available | Negative | 3389453 - 3390601 | 42525.3 |
| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase | SAMEA3472110_03286 | Not Available | Negative | 3390598 - 3391215 | 21396.8 |
| 2-dehydro-3-deoxygalactonokinase | SAMEA3472110_03287 | Not Available | Negative | 3391199 - 3392077 | 31400.3 |
| galactonate operon transcriptional repressor | SAMEA3472110_03288 | Not Available | Negative | 3392074 - 3392763 | 26081.1 |
| putative lipoprotein | SAMEA3472110_03289 | Not Available | Positive | 3393040 - 3393696 | 24131.9 |
| putative phosphatase | SAMEA3472110_03290 | Not Available | Negative | 3393740 - 3394552 | 29722.8 |
| radical sam domain-containing protein | SAMEA3472110_03291 | Not Available | Negative | 3394667 - 3395065 | 13787.4 |
| dna gyrase subunit b | SAMEA3472110_03292 | Not Available | Negative | 3395305 - 3397719 | 89955.0 |
| dna replication and repair protein | SAMEA3472110_03293 | Not Available | Negative | 3397748 - 3398821 | 40516.4 |
| dna polymerase iii | SAMEA3472110_03294 | Not Available | Negative | 3398821 - 3399921 | 40589.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





