Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transposase | SAMEA3472110_03181 | Not Available | Negative | 3287074 - 3287361 | 11289.5 |
| protein of uncharacterised function (duf2686) | SAMEA3472110_03182 | Not Available | Positive | 3288487 - 3289281 | 29707.0 |
| 50s ribosomal protein l9 | SAMEA3472110_03183 | Not Available | Negative | 3289352 - 3289801 | 15770.0 |
| 30s ribosomal protein s18 | SAMEA3472110_03184 | Not Available | Negative | 3289843 - 3290070 | 8986.94 |
| primosomal replication protein n | SAMEA3472110_03185 | Not Available | Negative | 3290075 - 3290389 | 11472.9 |
| 30s ribosomal protein s6 | SAMEA3472110_03186 | Not Available | Negative | 3290396 - 3290791 | 15187.9 |
| protein | SAMEA3472110_03187 | Not Available | Positive | 3291118 - 3291393 | 10149.9 |
| l-ribulose-5-phosphate 4-epimerase ulaf | SAMEA3472110_03188 | Not Available | Negative | 3291522 - 3292208 | 25337.2 |
| l-xylulose 5-phosphate 3-epimerase | SAMEA3472110_03189 | Not Available | Negative | 3292208 - 3293062 | 32054.5 |
| 3-keto-l-gulonate-6-phosphate decarboxylase | SAMEA3472110_03190 | Not Available | Negative | 3293072 - 3293722 | 23650.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





