Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inner membrane protein | SAMEA3472110_03129 | Not Available | Positive | 3229336 - 3229668 | 13324.8 |
| two-component system sensor kinase | SAMEA3472110_03130 | Not Available | Negative | 3229714 - 3231063 | 50240.6 |
| two-component system response regulator | SAMEA3472110_03131 | Not Available | Negative | 3231060 - 3231719 | 24719.2 |
| protein ygiw | SAMEA3472110_03132 | Not Available | Positive | 3231871 - 3232263 | 14011.5 |
| putative regulatory protein | SAMEA3472110_03133 | Not Available | Positive | 3232316 - 3232798 | 17832.2 |
| binding protein | SAMEA3472110_03134 | Not Available | Positive | 3232907 - 3234514 | 60696.1 |
| topoisomerase iv subunit a | SAMEA3472110_03135 | Not Available | Positive | 3234652 - 3236910 | 83838.4 |
| 1-acylglycerol-3-phosphate o-acyltransferase | SAMEA3472110_03136 | Not Available | Positive | 3237144 - 3237881 | 27410.7 |
| sufi protein | SAMEA3472110_03137 | Not Available | Positive | 3237956 - 3239368 | 51834.1 |
| radical sam superfamily protein | SAMEA3472110_03138 | Not Available | Positive | 3239479 - 3241698 | 83542.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





