Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thioredoxin-like protein | SAMEA3472110_03055 | Not Available | Negative | 3152082 - 3152774 | 25515.3 |
| metal dependent hydrolase | SAMEA3472110_03056 | Not Available | Negative | 3152851 - 3153354 | 19442.6 |
| putative enzyme | SAMEA3472110_03057 | Not Available | Positive | 3153439 - 3154575 | 42344.9 |
| 2,4-dienoyl-coa reductase | SAMEA3472110_03058 | Not Available | Negative | 3154693 - 3156711 | 72641.6 |
| uncharacterised protein | SAMEA3472110_03059 | Not Available | Negative | 3157016 - 3158557 | 56349.6 |
| glycosyl hydrolase | SAMEA3472110_03060 | Not Available | Negative | 3158849 - 3161200 | 88449.8 |
| uncharacterised protein | SAMEA3472110_03061 | Not Available | Negative | 3161217 - 3162287 | 40124.6 |
| putative amino acid permease | SAMEA3472110_03062 | Not Available | Negative | 3162421 - 3163854 | 52175.7 |
| evolved beta-galactosidase subunit beta | SAMEA3472110_03063 | Not Available | Negative | 3163917 - 3164366 | 17470.6 |
| cryptic beta-d-galactosidase subunit alpha | SAMEA3472110_03064 | Not Available | Negative | 3164363 - 3167455 | 117802.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





