Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| envz/ompr regulon moderator | SAMEA3472110_03044 | Not Available | Negative | 3140274 - 3140657 | 14173.0 |
| deda family membrane protein | SAMEA3472110_03045 | Not Available | Negative | 3140661 - 3141323 | 24587.0 |
| dna-binding transcriptional repressor exur | SAMEA3472110_03046 | Not Available | Negative | 3141668 - 3142444 | 29821.3 |
| hexuronate transporter | SAMEA3472110_03047 | Not Available | Negative | 3142574 - 3143872 | 46895.0 |
| glucuronate isomerase | SAMEA3472110_03048 | Not Available | Positive | 3144355 - 3145767 | 54059.3 |
| altronate hydrolase | SAMEA3472110_03049 | Not Available | Positive | 3145782 - 3147269 | 54069.1 |
| inner membrane protein | SAMEA3472110_03050 | Not Available | Positive | 3147352 - 3147903 | 20566.7 |
| putative transport protein | SAMEA3472110_03051 | Not Available | Negative | 3147908 - 3149152 | 43494.4 |
| putative ph-induced membrane-bound redox modulator | SAMEA3472110_03052 | Not Available | Negative | 3149768 - 3150733 | 35983.1 |
| putative oxidoreductase | SAMEA3472110_03054 | Not Available | Negative | 3151017 - 3152003 | 36472.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





