Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dipeptide transporter atp-binding subunit | SAMEA3472110_02971 | Not Available | Positive | 3060735 - 3061739 | 37554.6 |
| transport protein yhjv | SAMEA3472110_02972 | Not Available | Negative | 3061769 - 3063040 | 47303.4 |
| toxic polypeptide, small | SAMEA3472110_02974 | Not Available | Positive | 3063516 - 3063623 | 3915.0 |
| toxic polypeptide, small | SAMEA3472110_02976 | Not Available | Positive | 3063999 - 3064106 | 3809.81 |
| cellulose biosynthesis endoglucanase | SAMEA3472110_02977 | Not Available | Negative | 3064193 - 3065872 | 62007.2 |
| membrane protein yhjt | SAMEA3472110_02978 | Not Available | Negative | 3065869 - 3066060 | 7364.39 |
| cellulose biosynthesis protease | SAMEA3472110_02979 | Not Available | Negative | 3066057 - 3067616 | 59045.1 |
| protein of uncharacterised function (duf2629) | SAMEA3472110_02980 | Not Available | Positive | 3067900 - 3068088 | 7032.31 |
| cell division protein | SAMEA3472110_02981 | Not Available | Positive | 3068100 - 3068459 | 13226.8 |
| cell division protein | SAMEA3472110_02982 | Not Available | Positive | 3068544 - 3068852 | 11500.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





