Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inner membrane protein yiaa | SAMEA3472110_02949 | Not Available | Positive | 3037961 - 3038398 | 16123.6 |
| putative membrane-associated acyltransferase | SAMEA3472110_02950 | Not Available | Negative | 3038440 - 3039435 | 37622.2 |
| putative lipoprotein | SAMEA3472110_02951 | Not Available | Positive | 3039610 - 3039918 | 11622.3 |
| glycine trna synthetase | SAMEA3472110_02952 | Not Available | Positive | 3040013 - 3040924 | 34718.2 |
| glycine-trna synthetase, beta subunit | SAMEA3472110_02953 | Not Available | Positive | 3040934 - 3043003 | 76829.2 |
| putative transcriptional regulator | SAMEA3472110_02956 | Not Available | Negative | 3044158 - 3044448 | 11033.5 |
| putative lipoprotein | SAMEA3472110_02957 | Not Available | Positive | 3044882 - 3045592 | 25664.5 |
| 2-ketoaldonate reductase/glyoxylate reductase b | SAMEA3472110_02958 | Not Available | Negative | 3045642 - 3046616 | 35398.5 |
| putative outer membrane protein | SAMEA3472110_02959 | Not Available | Negative | 3046720 - 3047379 | 22198.6 |
| biotin sulfoxide reductase | SAMEA3472110_02960 | Not Available | Positive | 3047532 - 3049865 | 85827.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





