Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protease la | SAMEA3472110_02919 | Not Available | Negative | 3006276 - 3008036 | 65736.3 |
| putative dehydrogenase | SAMEA3472110_02920 | Not Available | Positive | 3008222 - 3008674 | 17694.4 |
| outer membrane protein a | SAMEA3472110_02921 | Not Available | Negative | 3008750 - 3009790 | 37175.7 |
| sos cell division inhibitor | SAMEA3472110_02922 | Not Available | Negative | 3010146 - 3010655 | 18802.5 |
| putative dna transformation protein with tfox domain | SAMEA3472110_02923 | Not Available | Positive | 3010874 - 3011503 | 24148.3 |
| membrane protein yccs | SAMEA3472110_02924 | Not Available | Negative | 3011466 - 3013628 | 82064.8 |
| putative inner membrane protein yccf | SAMEA3472110_02925 | Not Available | Negative | 3013638 - 3014084 | 16276.3 |
| dna helicase iv | SAMEA3472110_02926 | Not Available | Positive | 3014207 - 3016261 | 77975.5 |
| methylglyoxal synthase | SAMEA3472110_02927 | Not Available | Negative | 3016293 - 3016751 | 16919.6 |
| uncharacterized protein conserved in bacteria (duf2057) | SAMEA3472110_02928 | Not Available | Negative | 3016848 - 3017510 | 24595.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





