Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase, m48b family | SAMEA3472110_02879 | Not Available | Positive | 2957192 - 2957956 | 26778.7 |
| cytidylate kinase | SAMEA3472110_02880 | Not Available | Positive | 2958129 - 2958812 | 24747.8 |
| 30s ribosomal protein s1 | SAMEA3472110_02881 | Not Available | Positive | 2958923 - 2960596 | 61161.5 |
| integration host factor | SAMEA3472110_02882 | Not Available | Positive | 2960756 - 2961040 | 10651.8 |
| putative competence-related protein | SAMEA3472110_02883 | Not Available | Positive | 2961247 - 2963511 | 84578.0 |
| lipid a export permease msba | SAMEA3472110_02884 | Not Available | Positive | 2963548 - 2965296 | 64491.7 |
| tetraacyldisaccharide 4'-kinase (lipid a 4'-kinase) | SAMEA3472110_02885 | Not Available | Positive | 2965293 - 2966279 | 35624.5 |
| putative cytoplasmic protein | SAMEA3472110_02886 | Not Available | Positive | 2966316 - 2967548 | 47689.7 |
| peroxide and acid resistance protein, upf0434 family | SAMEA3472110_02887 | Not Available | Positive | 2967600 - 2967782 | 6855.35 |
| 3-deoxy-manno-octulosonate cytidylyltransferase | SAMEA3472110_02888 | Not Available | Positive | 2967779 - 2968525 | 27628.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





