Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein ycac | SAMEA3472110_02869 | Not Available | Negative | 2943328 - 2943954 | 23089.5 |
| major facilitator superfamily protein | SAMEA3472110_02870 | Not Available | Positive | 2944269 - 2945417 | 41462.2 |
| putative amino acid permease | SAMEA3472110_02871 | Not Available | Positive | 2945627 - 2947057 | 52469.5 |
| pyruvate formate lyase-activating enzyme 1 | SAMEA3472110_02872 | Not Available | Negative | 2947267 - 2948007 | 28205.9 |
| formate acetyltransferase 1 | SAMEA3472110_02873 | Not Available | Negative | 2948199 - 2950481 | 85305.0 |
| formate transporter | SAMEA3472110_02874 | Not Available | Negative | 2950536 - 2951732 | 44139.9 |
| putative fatty acid binding protein | SAMEA3472110_02875 | Not Available | Negative | 2951799 - 2953559 | 65610.9 |
| membrane protein ycap | SAMEA3472110_02876 | Not Available | Positive | 2953689 - 2954381 | 26269.4 |
| phosphoserine aminotransferase | SAMEA3472110_02877 | Not Available | Positive | 2954580 - 2955668 | 39826.6 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | SAMEA3472110_02878 | Not Available | Positive | 2955739 - 2957022 | 46166.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





