Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterised protein | SAMEA3472110_02808 | Not Available | Positive | 2883319 - 2883429 | 4157.11 |
| putative lipoprotein | SAMEA3472110_02809 | Not Available | Negative | 2883586 - 2883942 | 12946.4 |
| dna damage-inducible protein yebg | SAMEA3472110_02810 | Not Available | Negative | 2884009 - 2884299 | 10717.5 |
| phosphoribosylglycinamide formyltransferase 2 | SAMEA3472110_02811 | Not Available | Positive | 2884433 - 2885611 | 42414.1 |
| khg/kdpg aldolase | SAMEA3472110_02812 | Not Available | Negative | 2885667 - 2886308 | 22285.3 |
| phosphogluconate dehydratase | SAMEA3472110_02813 | Not Available | Negative | 2886345 - 2888156 | 64642.9 |
| glucose-6-phosphate dehydrogenase | SAMEA3472110_02814 | Not Available | Negative | 2888391 - 2889866 | 55707.5 |
| uncharacterised protein | SAMEA3472110_02815 | Not Available | Negative | 2890032 - 2890181 | 5714.39 |
| putative hex-regulon repressor (rpir-family transcriptional regulator) | SAMEA3472110_02816 | Not Available | Positive | 2890204 - 2891073 | 31971.4 |
| pyruvate kinase | SAMEA3472110_02817 | Not Available | Positive | 2891201 - 2892643 | 51360.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





