Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| zinc-type alcohol dehydrogenase-like protein ydjl | SAMEA3472110_02733 | Not Available | Negative | 2812543 - 2812899 | 12626.1 |
| putative cytoplasmic protein | SAMEA3472110_02734 | Not Available | Negative | 2813269 - 2813541 | 10296.5 |
| methionine sulfoxide reductase b | SAMEA3472110_02735 | Not Available | Negative | 2813583 - 2813996 | 15452.0 |
| glyceraldehyde 3-phosphate dehydrogenase a | SAMEA3472110_02736 | Not Available | Positive | 2814338 - 2815333 | 35548.5 |
| putative aldose 1-epimerase | SAMEA3472110_02737 | Not Available | Positive | 2815417 - 2816301 | 32727.9 |
| putative aldo/keto reductase | SAMEA3472110_02738 | Not Available | Negative | 2816352 - 2817206 | 30980.5 |
| mlta-interacting protein | SAMEA3472110_02739 | Not Available | Negative | 2817296 - 2818042 | 27832.4 |
| serine kinase family protein | SAMEA3472110_02740 | Not Available | Positive | 2818478 - 2820412 | 74484.3 |
| putative cytoplasmic protein | SAMEA3472110_02741 | Not Available | Positive | 2820525 - 2821808 | 49453.2 |
| putative signal transduction protein | SAMEA3472110_02742 | Not Available | Positive | 2821955 - 2823430 | 56042.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





