Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-asparaginase i | SAMEA3472110_02723 | Not Available | Positive | 2802427 - 2803443 | 37157.5 |
| nicotinamidase/pyrazinamidase | SAMEA3472110_02724 | Not Available | Positive | 2803454 - 2804095 | 23440.4 |
| metabolite transport protein | SAMEA3472110_02725 | Not Available | Negative | 2804188 - 2805546 | 50163.7 |
| deor-family transcriptional regulator | SAMEA3472110_02726 | Not Available | Negative | 2805663 - 2806421 | 28252.0 |
| putative sugar reductase | SAMEA3472110_02727 | Not Available | Negative | 2806558 - 2807538 | 36328.9 |
| sugar kinase | SAMEA3472110_02728 | Not Available | Negative | 2807548 - 2808495 | 34134.2 |
| putative sugar-bisphosphate aldolase | SAMEA3472110_02729 | Not Available | Negative | 2808500 - 2809336 | 30855.6 |
| putative zinc-binding dehydrogenase | SAMEA3472110_02730 | Not Available | Negative | 2809357 - 2810400 | 37692.9 |
| major facilitator superfamily protein | SAMEA3472110_02731 | Not Available | Negative | 2810417 - 2811796 | 49691.0 |
| putative oxidoreductase, zn-dependent and nad(p)-binding protein | SAMEA3472110_02732 | Not Available | Negative | 2811823 - 2812479 | 23674.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





