Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | SAMEA3472110_02713 | Not Available | Positive | 2791529 - 2792182 | 23877.9 |
| putative thiosulfate sulfurtransferase | SAMEA3472110_02714 | Not Available | Positive | 2792249 - 2793556 | 48190.9 |
| cytochrome oxidase | SAMEA3472110_02715 | Not Available | Negative | 2793565 - 2794185 | 22681.1 |
| ctp pyrophosphohydrolase | SAMEA3472110_02716 | Not Available | Positive | 2794272 - 2794679 | 15029.9 |
| protein | SAMEA3472110_02717 | Not Available | Negative | 2794645 - 2794917 | 9947.94 |
| nadp-specific glutamate dehydrogenase | SAMEA3472110_02718 | Not Available | Positive | 2795153 - 2796496 | 48572.2 |
| dna topoisomerase iii | SAMEA3472110_02719 | Not Available | Negative | 2796573 - 2798528 | 73167.9 |
| selenophosphate synthetase | SAMEA3472110_02720 | Not Available | Negative | 2798533 - 2799576 | 36687.5 |
| putative nitroreductase | SAMEA3472110_02721 | Not Available | Negative | 2799693 - 2800244 | 20088.2 |
| signal peptide peptidase sppa, 67k type | SAMEA3472110_02722 | Not Available | Positive | 2800405 - 2802261 | 67235.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





