Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | SAMEA3472110_02691 | Not Available | Negative | 2769187 - 2770212 | 38125.7 |
| abc transporter permease | SAMEA3472110_02692 | Not Available | Negative | 2770212 - 2771306 | 40362.6 |
| abc transporter substrate-binding protein | SAMEA3472110_02693 | Not Available | Negative | 2771307 - 2773121 | 69695.6 |
| putative signal transduction protein | SAMEA3472110_02694 | Not Available | Negative | 2773203 - 2774759 | 58561.4 |
| lipoprotein | SAMEA3472110_02695 | Not Available | Negative | 2774940 - 2775506 | 21041.1 |
| undecaprenyl pyrophosphate phosphatase | SAMEA3472110_02696 | Not Available | Negative | 2775918 - 2776631 | 26760.7 |
| cobalamin synthesis protein | SAMEA3472110_02697 | Not Available | Negative | 2776670 - 2777656 | 36061.3 |
| oxidoreductase yeiq | SAMEA3472110_02698 | Not Available | Negative | 2777774 - 2779240 | 53969.6 |
| elongation factor p-like protein | SAMEA3472110_02699 | Not Available | Negative | 2779463 - 2780035 | 21533.9 |
| upf0153 cysteine cluster protein, function uncharacterised | SAMEA3472110_02700 | Not Available | Positive | 2780190 - 2780444 | 8954.96 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





