Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetoacetate metabolism regulator (two-component system response regulator) | SAMEA3472110_02650 | Not Available | Negative | 2724258 - 2725643 | 52157.5 |
| sensory histidine kinase atos | SAMEA3472110_02651 | Not Available | Negative | 2725640 - 2727466 | 67807.1 |
| two-component system sensor kinase | SAMEA3472110_02652 | Not Available | Positive | 2727639 - 2730488 | 106541.0 |
| transcriptional regulator rcsb | SAMEA3472110_02653 | Not Available | Negative | 2730574 - 2731224 | 23672.0 |
| two-component system sensor kinase | SAMEA3472110_02654 | Not Available | Negative | 2731241 - 2733913 | 100381.0 |
| outer membrane porin protein c | SAMEA3472110_02656 | Not Available | Positive | 2734652 - 2735779 | 41275.4 |
| thiamine biosynthesis lipoprotein | SAMEA3472110_02657 | Not Available | Positive | 2735891 - 2736946 | 38565.9 |
| regulatory protein of adaptative response | SAMEA3472110_02658 | Not Available | Positive | 2737020 - 2738084 | 39364.1 |
| alpha-ketoglutarate-dependent dioxygenase (alkylated dna repair protein) | SAMEA3472110_02659 | Not Available | Positive | 2738084 - 2738734 | 23991.7 |
| abc transporter atpase/permease | SAMEA3472110_02660 | Not Available | Positive | 2738810 - 2740453 | 61598.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





