Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycerol-3-phosphate transporter | SAMEA3472110_02630 | Not Available | Positive | 2693405 - 2694763 | 50346.3 |
| glycerophosphodiester phosphodiesterase | SAMEA3472110_02631 | Not Available | Positive | 2694768 - 2695844 | 40860.6 |
| putative transcriptional regulator | SAMEA3472110_02632 | Not Available | Negative | 2695864 - 2696763 | 33506.9 |
| putative antibiotic efflux protein | SAMEA3472110_02633 | Not Available | Positive | 2696915 - 2698105 | 42895.2 |
| ph-inducible protein involved in stress response (putative kinase) | SAMEA3472110_02634 | Not Available | Positive | 2698186 - 2698836 | 25313.5 |
| putative ferredoxin | SAMEA3472110_02635 | Not Available | Negative | 2698890 - 2699144 | 9275.25 |
| ribonucleotide-diphosphate reductase subunit beta | SAMEA3472110_02636 | Not Available | Negative | 2699144 - 2700274 | 43519.6 |
| ribonucleoside-diphosphate reductase | SAMEA3472110_02637 | Not Available | Negative | 2700420 - 2702705 | 85772.0 |
| adhesin | SAMEA3472110_02638 | Not Available | Positive | 2703401 - 2707159 | 131188.0 |
| 3-demethylubiquinone-9 3-methyltransferase | SAMEA3472110_02639 | Not Available | Negative | 2707220 - 2707942 | 26633.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





