Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-amino-4-deoxy-l-arabinose-phosphoundecaprenol flippase subunit arnf | SAMEA3472110_02610 | Not Available | Negative | 2672395 - 2672781 | 14088.0 |
| inner membrane protein | SAMEA3472110_02611 | Not Available | Negative | 2672781 - 2673116 | 12192.7 |
| undecaprenyl phosphate-alpha-4-amino-4-deoxy-l-arabinose arabinosyl transferase | SAMEA3472110_02612 | Not Available | Negative | 2673113 - 2674765 | 62503.8 |
| putative polysaccharide deacetylase | SAMEA3472110_02613 | Not Available | Negative | 2674765 - 2675655 | 32990.4 |
| bifunctional polymyxin resistance protein | SAMEA3472110_02614 | Not Available | Negative | 2675652 - 2677634 | 74269.1 |
| undecaprenyl phosphate 4-deoxy-4-formamido-l-arabinose transferase | SAMEA3472110_02615 | Not Available | Negative | 2677634 - 2678602 | 36341.3 |
| udp-4-amino-4-deoxy-l-arabinose--oxoglutarate aminotransferase | SAMEA3472110_02616 | Not Available | Negative | 2678606 - 2679763 | 42197.9 |
| phosphoglycerate mutase | SAMEA3472110_02617 | Not Available | Positive | 2680053 - 2680655 | 22291.8 |
| nudix-family hydrolase | SAMEA3472110_02618 | Not Available | Negative | 2680694 - 2681119 | 16376.6 |
| outer membrane porin protein | SAMEA3472110_02619 | Not Available | Positive | 2681397 - 2681939 | 18577.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





