Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gntr family transcriptional regulator | SAMEA3472110_02576 | Not Available | Negative | 2639426 - 2640136 | 26940.3 |
| glutamine synthetase | SAMEA3472110_02578 | Not Available | Positive | 2642549 - 2643958 | 51906.6 |
| nitrogen regulation protein nr(ii) (two-component system sensor kinase) | SAMEA3472110_02579 | Not Available | Positive | 2644132 - 2645181 | 38558.5 |
| nitrogen regulation protein nr(i) | SAMEA3472110_02580 | Not Available | Positive | 2645193 - 2646602 | 52257.9 |
| small predicted membrane protein | SAMEA3472110_02581 | Not Available | Positive | 2646714 - 2646824 | 3648.48 |
| coproporphyrinogen iii oxidase | SAMEA3472110_02582 | Not Available | Negative | 2647014 - 2648387 | 52692.9 |
| gtpase activator | SAMEA3472110_02583 | Not Available | Negative | 2648576 - 2649085 | 19060.3 |
| gtp-binding protein | SAMEA3472110_02586 | Not Available | Positive | 2649667 - 2650299 | 23562.2 |
| dna polymerase i | SAMEA3472110_02588 | Not Available | Negative | 2650681 - 2653467 | 103124.0 |
| uncharacterised protein | SAMEA3472110_02589 | Not Available | Positive | 2653526 - 2653711 | 7195.83 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





