Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| galactose mutarotase | SAMEA3472110_02566 | Not Available | Negative | 2628453 - 2629340 | 32986.2 |
| transmembrane transport protein | SAMEA3472110_02567 | Not Available | Negative | 2629330 - 2630679 | 49211.9 |
| transporter | SAMEA3472110_02568 | Not Available | Negative | 2630778 - 2632211 | 50742.8 |
| dehydrogenase | SAMEA3472110_02569 | Not Available | Negative | 2632281 - 2633291 | 35963.7 |
| aldolase yiht | SAMEA3472110_02570 | Not Available | Negative | 2633324 - 2634211 | 31713.5 |
| oxidoreductase with nad(p)-binding rossmann-fold domain, 3-hydroxyisobutyrate dehydrogenase | SAMEA3472110_02571 | Not Available | Negative | 2634236 - 2635114 | 30416.1 |
| sugar kinase yihv | SAMEA3472110_02572 | Not Available | Positive | 2635287 - 2636183 | 31708.6 |
| transcriptional regulator yihw | SAMEA3472110_02573 | Not Available | Positive | 2636223 - 2637011 | 28754.5 |
| major facilitator superfamily protein | SAMEA3472110_02574 | Not Available | Negative | 2637071 - 2638336 | 46354.0 |
| putative sugar isomerase | SAMEA3472110_02575 | Not Available | Negative | 2638438 - 2639418 | 36975.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





