Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rhamnulose-1-phosphate aldolase | SAMEA3472110_02545 | Not Available | Positive | 2606051 - 2606875 | 30118.2 |
| l-rhamnose mutarotase | SAMEA3472110_02546 | Not Available | Positive | 2606885 - 2607199 | 12235.4 |
| putative porin | SAMEA3472110_02547 | Not Available | Negative | 2607240 - 2608634 | 51902.2 |
| fructose-like phosphotransferase system subunit eiia | SAMEA3472110_02548 | Not Available | Positive | 2609111 - 2609557 | 16118.4 |
| pts system subunit iic | SAMEA3472110_02549 | Not Available | Positive | 2609568 - 2611019 | 51160.6 |
| fructose-specific phosphotransferase system protein frvx | SAMEA3472110_02550 | Not Available | Positive | 2611009 - 2612079 | 38761.7 |
| frv operon regulatory protein | SAMEA3472110_02551 | Not Available | Positive | 2612079 - 2613827 | 66061.7 |
| putative lipoprotein | SAMEA3472110_02552 | Not Available | Negative | 2613883 - 2614938 | 39389.6 |
| formate dehydrogenase accessory protein | SAMEA3472110_02553 | Not Available | Negative | 2615091 - 2615924 | 30561.8 |
| formate dehydrogenase-o | SAMEA3472110_02555 | Not Available | Positive | 2619181 - 2620083 | 33102.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





