Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulatory protein cpxr | SAMEA3472110_02535 | Not Available | Positive | 2595021 - 2595719 | 26313.7 |
| two-component sensor kinase | SAMEA3472110_02536 | Not Available | Positive | 2595716 - 2597089 | 51627.3 |
| mosc domain-containing protein | SAMEA3472110_02537 | Not Available | Negative | 2597195 - 2597869 | 25346.1 |
| 2-keto-3-deoxygluconate permease | SAMEA3472110_02538 | Not Available | Negative | 2598018 - 2599001 | 33743.4 |
| mn dependent superoxide dismutase | SAMEA3472110_02539 | Not Available | Negative | 2599261 - 2599881 | 23080.2 |
| l rhamnose-proton symporter | SAMEA3472110_02540 | Not Available | Positive | 2600166 - 2601200 | 37304.1 |
| transcriptional activator rhar | SAMEA3472110_02541 | Not Available | Negative | 2601197 - 2602135 | 35738.4 |
| l-rhamnose operon regulatory protein | SAMEA3472110_02542 | Not Available | Negative | 2602119 - 2602955 | 32389.3 |
| rhamnulokinase | SAMEA3472110_02543 | Not Available | Positive | 2603243 - 2604712 | 54061.0 |
| l-rhamnose isomerase | SAMEA3472110_02544 | Not Available | Positive | 2604709 - 2605968 | 47188.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





