Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| universal stress protein d | SAMEA3472110_02525 | Not Available | Negative | 2586970 - 2587398 | 16276.0 |
| conserved protein, upf0381 family | SAMEA3472110_02526 | Not Available | Negative | 2587425 - 2587724 | 10746.7 |
| inner membrane protein | SAMEA3472110_02527 | Not Available | Negative | 2587936 - 2588376 | 16543.5 |
| protein of uncharacterised function (duf1454) | SAMEA3472110_02528 | Not Available | Positive | 2588477 - 2589076 | 21770.1 |
| triosephosphate isomerase | SAMEA3472110_02529 | Not Available | Positive | 2589184 - 2589951 | 26973.3 |
| cdp-diacylglycerol pyrophosphatase | SAMEA3472110_02530 | Not Available | Negative | 2590006 - 2590761 | 28398.3 |
| sulfate-binding protein (sulfate starvation-induced protein 2) | SAMEA3472110_02531 | Not Available | Negative | 2590868 - 2591857 | 36661.2 |
| 6-phosphofructokinase | SAMEA3472110_02532 | Not Available | Negative | 2592177 - 2593139 | 34844.2 |
| ferrous-iron efflux pump | SAMEA3472110_02533 | Not Available | Negative | 2593320 - 2594222 | 32929.2 |
| repressor cpxp | SAMEA3472110_02534 | Not Available | Negative | 2594371 - 2594871 | 19008.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





