Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative aspartate/ornithine carbamoyltransferase | SAMEA3472110_02443 | Not Available | Negative | 2501480 - 2502667 | 44058.7 |
| transcriptional regulator | SAMEA3472110_02444 | Not Available | Positive | 2503146 - 2504924 | 66111.0 |
| xanthine dehydrogenase iron-sulfur-binding subunit | SAMEA3472110_02445 | Not Available | Negative | 2504964 - 2505443 | 16888.7 |
| xanthine dehydrogenase fad-binding subunit | SAMEA3472110_02446 | Not Available | Negative | 2505440 - 2506318 | 31529.6 |
| xanthine dehydrogenase subunit xdha | SAMEA3472110_02447 | Not Available | Negative | 2506329 - 2508626 | 82686.0 |
| uncharacterised protein | SAMEA3472110_02448 | Not Available | Positive | 2508869 - 2509045 | 6853.01 |
| lipoprotein yger | SAMEA3472110_02449 | Not Available | Positive | 2509042 - 2509794 | 26452.9 |
| Trna-gly | Not Available | Not Available | Positive | 2509873 - 2509946 | Not Available |
| protein | SAMEA3472110_02451 | Not Available | Positive | 2510180 - 2511790 | 60966.2 |
| putative inner membrane protein | SAMEA3472110_02452 | Not Available | Positive | 2511856 - 2512035 | 6610.47 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





