Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative fad binding molybdopterin dehydrogenase | SAMEA3472110_02433 | Not Available | Negative | 2487793 - 2488572 | 28665.2 |
| putative amidohydrolase | SAMEA3472110_02434 | Not Available | Negative | 2488623 - 2489951 | 48827.2 |
| pyridine nucleotide-disulfide oxidoreductase | SAMEA3472110_02435 | Not Available | Negative | 2489954 - 2493052 | 115566.0 |
| ctp:molybdopterin cytidylyltransferase | SAMEA3472110_02436 | Not Available | Negative | 2493374 - 2493952 | 21552.3 |
| selenium-dependent hydroxylase accessory protein yqec | SAMEA3472110_02437 | Not Available | Positive | 2494055 - 2494825 | 28208.2 |
| nad(p)-binding rossman fold | SAMEA3472110_02438 | Not Available | Positive | 2494873 - 2496498 | 57697.5 |
| carbamate kinase | SAMEA3472110_02439 | Not Available | Negative | 2496539 - 2497471 | 33072.9 |
| phenylhydantoinase | SAMEA3472110_02440 | Not Available | Negative | 2497519 - 2498904 | 51046.2 |
| putative peptidase | SAMEA3472110_02441 | Not Available | Negative | 2498957 - 2500168 | 44806.4 |
| putative diaminopropionate ammonia-lyase | SAMEA3472110_02442 | Not Available | Negative | 2500226 - 2501422 | 43330.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





