Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arginine exporter | SAMEA3472110_02391 | Not Available | Positive | 2441371 - 2442006 | 23157.0 |
| oxidative stress defense protein | SAMEA3472110_02392 | Not Available | Positive | 2442099 - 2442839 | 26636.7 |
| dna-binding transcriptional regulator | SAMEA3472110_02393 | Not Available | Positive | 2443007 - 2443903 | 34702.7 |
| putative acetyl-coa hydrolase/transferase | SAMEA3472110_02394 | Not Available | Negative | 2443900 - 2445378 | 53872.6 |
| methylmalonyl-coa decarboxylase | SAMEA3472110_02395 | Not Available | Negative | 2445402 - 2446187 | 29160.3 |
| lao/ao transport system kinase | SAMEA3472110_02396 | Not Available | Negative | 2446198 - 2447193 | 36679.1 |
| methylmalonyl-coa mutase | SAMEA3472110_02397 | Not Available | Negative | 2447186 - 2449330 | 77851.6 |
| chromosome initiation inhibitor | SAMEA3472110_02398 | Not Available | Negative | 2449534 - 2450427 | 33473.6 |
| ribose-5-phosphate isomerase a | SAMEA3472110_02399 | Not Available | Positive | 2450810 - 2451469 | 22889.9 |
| d-3-phosphoglycerate dehydrogenase | SAMEA3472110_02400 | Not Available | Positive | 2451725 - 2452957 | 44178.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





