Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterised protein | SAMEA3472110_02270 | Not Available | Negative | 2322396 - 2322677 | 10649.0 |
| type 1 fimbriae regulatory protein fimb | SAMEA3472110_02271 | Not Available | Positive | 2323436 - 2323999 | 21803.6 |
| hth dna-binding domain-containing protein | SAMEA3472110_02272 | Not Available | Positive | 2324860 - 2325654 | 29611.3 |
| uncharacterised protein | SAMEA3472110_02273 | Not Available | Positive | 2325651 - 2325791 | 5331.64 |
| uncharacterised protein | SAMEA3472110_02274 | Not Available | Positive | 2325808 - 2326569 | 28280.4 |
| adhesin | SAMEA3472110_02275 | Not Available | Positive | 2326611 - 2328908 | 79390.5 |
| inner membrane protein | SAMEA3472110_02276 | Not Available | Positive | 2329092 - 2329760 | 25462.0 |
| transporter | SAMEA3472110_02277 | Not Available | Negative | 2330001 - 2330696 | 25127.1 |
| putative electron transport protein ykgf | SAMEA3472110_02278 | Not Available | Negative | 2330689 - 2332116 | 53026.9 |
| hydroxyacid oxidoreductase (fe-s centre) | SAMEA3472110_02279 | Not Available | Negative | 2332127 - 2332846 | 26036.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





