Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein | SAMEA3472110_02260 | Not Available | Negative | 2307317 - 2308180 | 32116.4 |
| ankyrin | SAMEA3472110_02261 | Not Available | Negative | 2308220 - 2308825 | 21720.4 |
| inner membrane protein | SAMEA3472110_02262 | Not Available | Positive | 2309083 - 2309580 | 17285.0 |
| lysr family transcriptional regulator | SAMEA3472110_02263 | Not Available | Positive | 2309672 - 2310604 | 34802.9 |
| putative signal transduction protein | SAMEA3472110_02264 | Not Available | Negative | 2310646 - 2311734 | 40606.3 |
| autotransporter | SAMEA3472110_02265 | Not Available | Negative | 2311876 - 2315859 | 140900.0 |
| high-affinity choline transport protein (bcct-family transporter) | SAMEA3472110_02266 | Not Available | Negative | 2316434 - 2318467 | 75846.5 |
| transcriptional regulator beti | SAMEA3472110_02267 | Not Available | Positive | 2318596 - 2319183 | 21800.3 |
| betaine aldehyde dehydrogenase | SAMEA3472110_02268 | Not Available | Positive | 2319197 - 2320669 | 53011.3 |
| choline dehydrogenase | SAMEA3472110_02269 | Not Available | Positive | 2320683 - 2322371 | 62563.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





