Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative atp-dependent rna helicase | SAMEA3472110_02155 | Not Available | Positive | 2200076 - 2201341 | 47128.7 |
| guanosine pentaphosphate phosphohydrolase | SAMEA3472110_02156 | Not Available | Positive | 2201477 - 2202961 | 54903.5 |
| atp-dependent dna helicase | SAMEA3472110_02157 | Not Available | Negative | 2203008 - 2205029 | 77029.6 |
| yifn | SAMEA3472110_02158 | Not Available | Positive | 2205247 - 2205696 | 16900.4 |
| peptidyl-prolyl cis-trans isomerase c | SAMEA3472110_02159 | Not Available | Positive | 2205848 - 2206129 | 10246.7 |
| ketol-acid reductoisomerase | SAMEA3472110_02160 | Not Available | Negative | 2206175 - 2207650 | 54058.1 |
| dna-binding transcriptional regulator ilvy | SAMEA3472110_02161 | Not Available | Positive | 2207800 - 2208690 | 33092.2 |
| threonine dehydratase | SAMEA3472110_02162 | Not Available | Negative | 2208687 - 2210231 | 56217.5 |
| dihydroxy-acid dehydratase | SAMEA3472110_02163 | Not Available | Negative | 2210234 - 2212084 | 65566.4 |
| branched-chain amino-acid aminotransferase | SAMEA3472110_02164 | Not Available | Negative | 2212149 - 2213078 | 34095.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





