Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diaminopimelate epimerase | SAMEA3472110_02123 | Not Available | Negative | 2170161 - 2170985 | 30210.4 |
| putative lipoprotein | SAMEA3472110_02124 | Not Available | Negative | 2171022 - 2171225 | 7177.59 |
| putative iron-interacting protein | SAMEA3472110_02125 | Not Available | Positive | 2171691 - 2172011 | 12232.0 |
| adenylate cyclase | SAMEA3472110_02126 | Not Available | Negative | 2172051 - 2174597 | 97735.5 |
| porphobilinogen deaminase | SAMEA3472110_02127 | Not Available | Positive | 2174963 - 2175925 | 34632.0 |
| uroporphyrinogen iii synthase | SAMEA3472110_02128 | Not Available | Positive | 2175922 - 2176662 | 27882.6 |
| putative uroporphyrinogen iii c-methyltransferase | SAMEA3472110_02129 | Not Available | Positive | 2176684 - 2177889 | 43653.1 |
| porphyrin biosynthetic protein | SAMEA3472110_02130 | Not Available | Positive | 2177892 - 2179088 | 45247.7 |
| arylsulfatase | SAMEA3472110_02133 | Not Available | Positive | 2179767 - 2181422 | 60707.9 |
| arylsulfatase | SAMEA3472110_02134 | Not Available | Negative | 2181513 - 2182748 | 46390.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





